spatialdata._io.format.CurrentPointsFormat#
- spatialdata._io.format.CurrentPointsFormat#
alias of
PointsFormatV01
Attributes table#
Methods table#
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Not ideal. |
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Validates that a list of dicts contains a 'scale' transformation |
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Attributes#
- CurrentPointsFormat.REQUIRED_PLATE_WELL_KEYS: Dict[str, type] = {'columnIndex': <class 'int'>, 'path': <class 'str'>, 'rowIndex': <class 'int'>}#
- CurrentPointsFormat.spatialdata_format_version#
- CurrentPointsFormat.version#
Methods#
- CurrentPointsFormat.attrs_from_dict(metadata)#
- Return type:
dict
[str
,dict
[str
,Any
]]
- CurrentPointsFormat.attrs_to_dict(data)#
- Return type:
dict
[str
,dict
[str
,Any
]]
- CurrentPointsFormat.generate_coordinate_transformations(shapes)#
- Return type:
Optional
[List
[List
[Dict
[str
,Any
]]]]
- CurrentPointsFormat.generate_well_dict(well, rows, columns)#
- Return type:
dict
- CurrentPointsFormat.init_channels()#
- Return type:
None
- CurrentPointsFormat.init_store(path, mode='r')#
Not ideal. Stores should remain hidden TODO: could also check dimension_separator
- Return type:
FSStore
- CurrentPointsFormat.matches(metadata)#
- Return type:
bool
- CurrentPointsFormat.validate_coordinate_transformations(ndim, nlevels, coordinate_transformations=None)#
Validates that a list of dicts contains a ‘scale’ transformation
Raises ValueError if no ‘scale’ found or doesn’t match ndim.
- Parameters:
ndim (
int
) – Number of image dimensions.- Return type:
None
- CurrentPointsFormat.validate_well_dict(well, rows, columns)#
- Return type:
None